| Date | Phase | Home | Away | |||
|---|---|---|---|---|---|---|
| 27/11/2012 | Quarter-finals | Lokomotiva Zagreb | | 0-0 | | GOSK Dubrovnik |
| 27/11/2012 | Quarter-finals | Osijek | | 1-3 | | Cibalia |
| 28/11/2012 | Quarter-finals | Slaven Koprivnica | | 3-1 | | Zadar |
| 12/12/2012 | Quarter-finals | Hajduk Split | | 2-0 | | Zelina |
| 03/04/2013 | Semi-finals | Cibalia | | 1-1 | | Lokomotiva Zagreb |
| 10/04/2013 | Semi-finals | Slaven Koprivnica | | 1-2 | | Hajduk Split |
| 17/04/2013 | Semi-finals | Hajduk Split | | 1-1 | | Slaven Koprivnica |
| 17/04/2013 | Semi-finals | Lokomotiva Zagreb | | 3-0 | | Cibalia |
| 08/05/2013 | Final | Hajduk Split | | 2-1 | | Lokomotiva Zagreb |
| 22/05/2013 | Final | Lokomotiva Zagreb | | 3-3 | | Hajduk Split |